Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENKD1 | L5KUQ6_PTEAL | L5KTH2 | L5KUQ6 | Enkurin domain-containing protein. | Clathrin heavy chain linker domain-containing protein 1. | 0.605 |
ENKD1 | SCRN1 | L5KTH2 | L5KPQ7 | Enkurin domain-containing protein. | Secernin-1. | 0.525 |
ENKD1 | TMEM129 | L5KTH2 | L5K4W8 | Enkurin domain-containing protein. | Transmembrane protein 129. | 0.626 |
L5KRT9_PTEAL | MET | L5KRT9 | L5KR88 | Hepatocyte growth factor receptor. | Hepatocyte growth factor receptor. | 0.946 |
L5KRT9_PTEAL | MST1R | L5KRT9 | L5KVU7 | Hepatocyte growth factor receptor. | Macrophage-stimulating protein receptor. | 0.526 |
L5KRT9_PTEAL | SCRN1 | L5KRT9 | L5KPQ7 | Hepatocyte growth factor receptor. | Secernin-1. | 0.453 |
L5KUQ6_PTEAL | ENKD1 | L5KUQ6 | L5KTH2 | Clathrin heavy chain linker domain-containing protein 1. | Enkurin domain-containing protein. | 0.605 |
L5KUQ6_PTEAL | PCK2 | L5KUQ6 | L5KKC0 | Clathrin heavy chain linker domain-containing protein 1. | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial. | 0.510 |
L5KUQ6_PTEAL | SCRN1 | L5KUQ6 | L5KPQ7 | Clathrin heavy chain linker domain-containing protein 1. | Secernin-1. | 0.622 |
L5KUQ6_PTEAL | TMEM129 | L5KUQ6 | L5K4W8 | Clathrin heavy chain linker domain-containing protein 1. | Transmembrane protein 129. | 0.509 |
MET | L5KRT9_PTEAL | L5KR88 | L5KRT9 | Hepatocyte growth factor receptor. | Hepatocyte growth factor receptor. | 0.946 |
MET | MST1R | L5KR88 | L5KVU7 | Hepatocyte growth factor receptor. | Macrophage-stimulating protein receptor. | 0.526 |
MET | SCRN1 | L5KR88 | L5KPQ7 | Hepatocyte growth factor receptor. | Secernin-1. | 0.453 |
MST1R | L5KRT9_PTEAL | L5KVU7 | L5KRT9 | Macrophage-stimulating protein receptor. | Hepatocyte growth factor receptor. | 0.526 |
MST1R | MET | L5KVU7 | L5KR88 | Macrophage-stimulating protein receptor. | Hepatocyte growth factor receptor. | 0.526 |
MST1R | SCRN1 | L5KVU7 | L5KPQ7 | Macrophage-stimulating protein receptor. | Secernin-1. | 0.453 |
PCK2 | L5KUQ6_PTEAL | L5KKC0 | L5KUQ6 | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial. | Clathrin heavy chain linker domain-containing protein 1. | 0.510 |
PCK2 | SCRN1 | L5KKC0 | L5KPQ7 | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial. | Secernin-1. | 0.463 |
SCRN1 | ENKD1 | L5KPQ7 | L5KTH2 | Secernin-1. | Enkurin domain-containing protein. | 0.525 |
SCRN1 | L5KRT9_PTEAL | L5KPQ7 | L5KRT9 | Secernin-1. | Hepatocyte growth factor receptor. | 0.453 |
page 1 of 2