STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KQD7_PTEALTransmembrane protein 179B. (259 aa)    
Predicted Functional Partners:
EPRS
Bifunctional aminoacyl-tRNA synthetase.
  
 
 0.718
SUPT3H
Transcription initiation protein SPT3 like protein.
    
 
 0.711
VARS
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.700
L5KH88_PTEAL
SAGA-associated factor 29 like protein.
    
 
 0.693
TAF9B
Transcription initiation factor TFIID subunit 9B.
    
 
 0.677
TAF12
Transcription initiation factor TFIID subunit 12.
    
 
 0.676
TADA3
Transcriptional adapter 3-like protein.
    
 
 0.662
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.650
L5KZT9_PTEAL
Transcriptional adapter 1-like protein.
    
 
 0.647
PALB2
Partner and localizer of BRCA2.
   
 
 0.628
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.