STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN3Matrilin-3. (435 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
   
 0.922
CRELD2
Cysteine-rich with EGF-like domain protein 2.
    
 0.751
L5L495_PTEAL
Aggrecan core protein.
   
 0.651
LUM
Lumican.
   
 0.605
PDIA6
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
    
 0.561
CNMD
Chondromodulin-1.
   
 0.560
L5L7H6_PTEAL
Cartilage intermediate layer protein 2.
   
 
 0.525
BRINP1
Deleted in bladder cancer protein 1 like protein.
      
 0.520
OMD
Osteomodulin.
   
 0.519
GPR26
Putative G-protein coupled receptor 26.
    
 0.516
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.