Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTAF1 | L5JQA0_PTEAL | L5JNK6 | L5JQA0 | TATA-binding protein-associated factor 172. | TATA-binding protein-associated factor 172. | 0.404 |
BTAF1 | L5KS91_PTEAL | L5JNK6 | L5KS91 | TATA-binding protein-associated factor 172. | Protein strawberry notch like protein 1. | 0.657 |
BTAF1 | LTN1 | L5JNK6 | L5KYS1 | TATA-binding protein-associated factor 172. | RING finger protein 160. | 0.523 |
BTAF1 | MED13 | L5JNK6 | L5JQP2 | TATA-binding protein-associated factor 172. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.570 |
BTAF1 | PDS5A | L5JNK6 | L5JX29 | TATA-binding protein-associated factor 172. | Sister chromatid cohesion protein PDS5 like protein A. | 0.575 |
BTAF1 | RIF1 | L5JNK6 | L5JYS2 | TATA-binding protein-associated factor 172. | Telomere-associated protein RIF1. | 0.528 |
CAB39L | L5KS91_PTEAL | L5KB53 | L5KS91 | Calcium-binding protein 39-like protein. | Protein strawberry notch like protein 1. | 0.525 |
L5JQA0_PTEAL | BTAF1 | L5JQA0 | L5JNK6 | TATA-binding protein-associated factor 172. | TATA-binding protein-associated factor 172. | 0.404 |
L5JQA0_PTEAL | L5KS91_PTEAL | L5JQA0 | L5KS91 | TATA-binding protein-associated factor 172. | Protein strawberry notch like protein 1. | 0.657 |
L5JQA0_PTEAL | LTN1 | L5JQA0 | L5KYS1 | TATA-binding protein-associated factor 172. | RING finger protein 160. | 0.523 |
L5JQA0_PTEAL | MED13 | L5JQA0 | L5JQP2 | TATA-binding protein-associated factor 172. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.570 |
L5JQA0_PTEAL | PDS5A | L5JQA0 | L5JX29 | TATA-binding protein-associated factor 172. | Sister chromatid cohesion protein PDS5 like protein A. | 0.575 |
L5JQA0_PTEAL | RIF1 | L5JQA0 | L5JYS2 | TATA-binding protein-associated factor 172. | Telomere-associated protein RIF1. | 0.528 |
L5KS91_PTEAL | BTAF1 | L5KS91 | L5JNK6 | Protein strawberry notch like protein 1. | TATA-binding protein-associated factor 172. | 0.657 |
L5KS91_PTEAL | CAB39L | L5KS91 | L5KB53 | Protein strawberry notch like protein 1. | Calcium-binding protein 39-like protein. | 0.525 |
L5KS91_PTEAL | L5JQA0_PTEAL | L5KS91 | L5JQA0 | Protein strawberry notch like protein 1. | TATA-binding protein-associated factor 172. | 0.657 |
L5KS91_PTEAL | LTN1 | L5KS91 | L5KYS1 | Protein strawberry notch like protein 1. | RING finger protein 160. | 0.776 |
L5KS91_PTEAL | MED13 | L5KS91 | L5JQP2 | Protein strawberry notch like protein 1. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.515 |
L5KS91_PTEAL | OLA1 | L5KS91 | L5JZE6 | Protein strawberry notch like protein 1. | Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. | 0.589 |
L5KS91_PTEAL | PDS5A | L5KS91 | L5JX29 | Protein strawberry notch like protein 1. | Sister chromatid cohesion protein PDS5 like protein A. | 0.684 |
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