SNED1 protein (Pteropus alecto) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

SNED1

Sushi, nidogen and EGF-like domain-containing protein 1. (180 aa)

Predicted Functional Partners:

NAT10

0.720

SUSD5

0.650

L5JPI5_PTEAL

0.616

L5KBB8_PTEAL

0.612

L5JX20_PTEAL

0.592

L5JWF3_PTEAL

0.584

L5KSH1_PTEAL

0.536

SLC44A2

0.523

FAU

0.522

L5JPU3_PTEAL

0.514

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAU	SNED1	L5KQY2	L5KT77	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.522
L5JPI5_PTEAL	SNED1	L5JPI5	L5KT77	Reelin.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.616
L5JPU3_PTEAL	SNED1	L5JPU3	L5KT77	UDP-glucuronosyltransferase 1-3.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.514
L5JWF3_PTEAL	SNED1	L5JWF3	L5KT77	Asialoglycoprotein receptor 2.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.584
L5JX20_PTEAL	SLC44A2	L5JX20	L5L3J5	Solute carrier family 23 member 1.	Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family.	0.457
L5JX20_PTEAL	SNED1	L5JX20	L5KT77	Solute carrier family 23 member 1.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.592
L5KBB8_PTEAL	SNED1	L5KBB8	L5KT77	Dynein heavy chain 7, axonemal.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.612
L5KSH1_PTEAL	SNED1	L5KSH1	L5KT77	Ankyrin repeat and MYND domain-containing protein 1.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.536
NAT10	SNED1	L5KXY1	L5KT77	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.720
SLC44A2	L5JX20_PTEAL	L5L3J5	L5JX20	Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family.	Solute carrier family 23 member 1.	0.457
SLC44A2	SNED1	L5L3J5	L5KT77	Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family.	Sushi, nidogen and EGF-like domain-containing protein 1.	0.523
SNED1	FAU	L5KT77	L5KQY2	Sushi, nidogen and EGF-like domain-containing protein 1.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.522
SNED1	L5JPI5_PTEAL	L5KT77	L5JPI5	Sushi, nidogen and EGF-like domain-containing protein 1.	Reelin.	0.616
SNED1	L5JPU3_PTEAL	L5KT77	L5JPU3	Sushi, nidogen and EGF-like domain-containing protein 1.	UDP-glucuronosyltransferase 1-3.	0.514
SNED1	L5JWF3_PTEAL	L5KT77	L5JWF3	Sushi, nidogen and EGF-like domain-containing protein 1.	Asialoglycoprotein receptor 2.	0.584
SNED1	L5JX20_PTEAL	L5KT77	L5JX20	Sushi, nidogen and EGF-like domain-containing protein 1.	Solute carrier family 23 member 1.	0.592
SNED1	L5KBB8_PTEAL	L5KT77	L5KBB8	Sushi, nidogen and EGF-like domain-containing protein 1.	Dynein heavy chain 7, axonemal.	0.612
SNED1	L5KSH1_PTEAL	L5KT77	L5KSH1	Sushi, nidogen and EGF-like domain-containing protein 1.	Ankyrin repeat and MYND domain-containing protein 1.	0.536
SNED1	NAT10	L5KT77	L5KXY1	Sushi, nidogen and EGF-like domain-containing protein 1.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.720
SNED1	SLC44A2	L5KT77	L5L3J5	Sushi, nidogen and EGF-like domain-containing protein 1.	Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family.	0.523