STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEURL3E3 ubiquitin-protein ligase LINCR. (231 aa)    
Predicted Functional Partners:
HERC6
Putative E3 ubiquitin-protein ligase HERC6.
    
 
 0.612
QSOX1
Sulfhydryl oxidase.
      
 0.552
SGMS1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
      
 0.511
TRIM22
E3 ubiquitin-protein ligase TRIM22.
      
 0.480
SAMHD1
SAM domain and HD domain-containing protein 1.
      
 0.460
SLC10A3
P3 protein.
      
 0.454
L5KYD9_PTEAL
Solute carrier family 10 member 6.
      
 0.454
RCHY1
RING finger and CHY zinc finger domain-containing protein 1.
      
 0.453
SGSM1
Small G protein signaling modulator 1.
      
 0.452
FAM43B
Protein FAM43B.
      
 0.445
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.