STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONONon-POU domain-containing octamer-binding protein. (299 aa)    
Predicted Functional Partners:
L5KXX4_PTEAL
Non-POU domain-containing octamer-binding protein.
 
     0.923
L5JU31_PTEAL
Splicing factor, proline-and glutamine-rich.
      
0.717
RBM14
RNA-binding protein 14.
   
 
 0.654
L5KC42_PTEAL
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.606
L5KCM8_PTEAL
Paraspeckle component 1.
  
   
0.595
L5JXS4_PTEAL
Matrin-3.
   
 
 0.578
NUDT21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
   
 
 0.550
L5JTR0_PTEAL
Proline-rich protein PRCC.
      
 0.511
L5KH85_PTEAL
Uncharacterized protein.
   
 
 0.478
L5KHE7_PTEAL
RNA-binding protein FUS.
   
 
 0.478
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.