STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN1Caprin-1. (713 aa)    
Predicted Functional Partners:
G3BP1
Ras GTPase-activating protein-binding protein 1.
   
 
 0.972
L5KZ81_PTEAL
Ras GTPase-activating protein-binding protein 2.
   
 
 0.923
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.810
UBAP2L
Ubiquitin-associated protein 2-like protein.
   
 
 0.799
L5JMU9_PTEAL
Fragile X mental retardation syndrome-related protein 1.
    
 
 0.793
CSDE1
Cold shock domain-containing protein E1.
   
 
 0.755
TIA1
Nucleolysin TIA-1 isoform p40.
   
 
 0.747
L5KXT3_PTEAL
BAT2 domain-containing protein 1.
   
 
 0.744
L5KRX7_PTEAL
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.727
OGFOD1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1.
      
 0.722
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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