STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP21Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (593 aa)    
Predicted Functional Partners:
L5KN63_PTEAL
ADP-ribosylation factor-like protein 16.
   
 
 0.864
L5KV12_PTEAL
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.842
GATA3
Trans-acting T-cell-specific transcription factor GATA-3.
    
 0.828
L5L6X9_PTEAL
60S ribosomal protein L40.
   
 0.816
DDX58
Putative ATP-dependent RNA helicase DDX58.
    
 0.797
UBC
Ubiquitin.
   
 0.773
L5KWC8_PTEAL
Ubiquitin.
   
 0.773
RNF125
E3 ubiquitin-protein ligase RNF125.
    
 
 0.704
ARL5B
ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.630
STAM2
Signal transducing adapter molecule 2.
    
 0.628
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.