STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM108Transmembrane protein 108. (166 aa)    
Predicted Functional Partners:
SYNDIG1L
Capucin.
      
 0.720
SH3GL2
Endophilin-A1.
      
 0.693
SYNDIG1
Transmembrane protein 90B.
      
 0.679
L5KK77_PTEAL
T-box transcription factor TBX6.
      
 0.618
CDV3
Protein CDV3 like protein.
      
 0.594
EPHA7
Ephrin type-A receptor 7.
      
 0.511
L5JRI9_PTEAL
Ephrin type-A receptor 10.
      
 0.511
L5JVF4_PTEAL
WD repeat-containing protein 64.
      
 0.502
CACHD1
VWFA and cache domain-containing protein 1.
      
 0.473
UPK3B
Uroplakin-3b.
      
 0.459
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.