Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP1B | DEDD | L5JWE5 | L5KZG6 | mRNA-decapping enzyme 1B. | Death effector domain-containing protein. | 0.452 |
DEDD | DCP1B | L5KZG6 | L5JWE5 | Death effector domain-containing protein. | mRNA-decapping enzyme 1B. | 0.452 |
DEDD | ERI1 | L5KZG6 | L5KDC7 | Death effector domain-containing protein. | 3'-5' exoribonuclease 1. | 0.501 |
DEDD | L5KEH4_PTEAL | L5KZG6 | L5KEH4 | Death effector domain-containing protein. | Poly(A)-specific ribonuclease PARN-like domain-containing protein 1. | 0.602 |
DEDD | L5KRG7_PTEAL | L5KZG6 | L5KRG7 | Death effector domain-containing protein. | Poly(A)-specific ribonuclease PARN. | 0.507 |
DEDD | PARN | L5KZG6 | L5KQN1 | Death effector domain-containing protein. | Poly(A)-specific ribonuclease PARN. | 0.507 |
DEDD | REXO4 | L5KZG6 | L5KA26 | Death effector domain-containing protein. | RNA exonuclease 4. | 0.599 |
DEDD | SART1 | L5KZG6 | L5KQV8 | Death effector domain-containing protein. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.402 |
DEDD | ZNHIT2 | L5KZG6 | L5KPW5 | Death effector domain-containing protein. | Zinc finger HIT domain-containing protein 2. | 0.446 |
ERI1 | DEDD | L5KDC7 | L5KZG6 | 3'-5' exoribonuclease 1. | Death effector domain-containing protein. | 0.501 |
L5KEH4_PTEAL | DEDD | L5KEH4 | L5KZG6 | Poly(A)-specific ribonuclease PARN-like domain-containing protein 1. | Death effector domain-containing protein. | 0.602 |
L5KRG7_PTEAL | DEDD | L5KRG7 | L5KZG6 | Poly(A)-specific ribonuclease PARN. | Death effector domain-containing protein. | 0.507 |
L5KRG7_PTEAL | PARN | L5KRG7 | L5KQN1 | Poly(A)-specific ribonuclease PARN. | Poly(A)-specific ribonuclease PARN. | 0.899 |
PARN | DEDD | L5KQN1 | L5KZG6 | Poly(A)-specific ribonuclease PARN. | Death effector domain-containing protein. | 0.507 |
PARN | L5KRG7_PTEAL | L5KQN1 | L5KRG7 | Poly(A)-specific ribonuclease PARN. | Poly(A)-specific ribonuclease PARN. | 0.899 |
REXO4 | DEDD | L5KA26 | L5KZG6 | RNA exonuclease 4. | Death effector domain-containing protein. | 0.599 |
SART1 | DEDD | L5KQV8 | L5KZG6 | U4/U6.U5 tri-snRNP-associated protein 1. | Death effector domain-containing protein. | 0.402 |
SART1 | ZNHIT2 | L5KQV8 | L5KPW5 | U4/U6.U5 tri-snRNP-associated protein 1. | Zinc finger HIT domain-containing protein 2. | 0.457 |
ZNHIT2 | DEDD | L5KPW5 | L5KZG6 | Zinc finger HIT domain-containing protein 2. | Death effector domain-containing protein. | 0.446 |
ZNHIT2 | SART1 | L5KPW5 | L5KQV8 | Zinc finger HIT domain-containing protein 2. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.457 |