STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDD1Rhomboid domain-containing protein 1. (189 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.723
POPDC2
Popeye domain-containing protein 2.
    
 
 0.652
TMEM214
Transmembrane protein 214.
      
 0.637
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.615
CDCA3
Cell division cycle-associated protein 3.
      
 0.546
TMEM38A
Trimeric intracellular cation channel type A.
      
 0.541
CKAP4
Cytoskeleton-associated protein 4.
    
 
 0.518
L5L7G3_PTEAL
Transmembrane protein 161A.
      
 0.518
ACAP2
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2.
      
 0.512
L5KJZ9_PTEAL
Rhomboid-related protein 1; Belongs to the peptidase S54 family.
      
 0.507
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.