Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARHGAP28 | CORO6 | L5K310 | L5JRB6 | Rho GTPase-activating protein 28. | Coronin; Belongs to the WD repeat coronin family. | 0.452 |
ARHGAP28 | L5L309_PTEAL | L5K310 | L5L309 | Rho GTPase-activating protein 28. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.563 |
ARHGAP28 | NRSN1 | L5K310 | L5K4U4 | Rho GTPase-activating protein 28. | Neurensin-1. | 0.475 |
CORO6 | ARHGAP28 | L5JRB6 | L5K310 | Coronin; Belongs to the WD repeat coronin family. | Rho GTPase-activating protein 28. | 0.452 |
CORO6 | L5K0K0_PTEAL | L5JRB6 | L5K0K0 | Coronin; Belongs to the WD repeat coronin family. | Rho guanine nucleotide exchange factor 5. | 0.785 |
CORO6 | L5L309_PTEAL | L5JRB6 | L5L309 | Coronin; Belongs to the WD repeat coronin family. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.531 |
CORO6 | NRSN1 | L5JRB6 | L5K4U4 | Coronin; Belongs to the WD repeat coronin family. | Neurensin-1. | 0.400 |
FEZ2 | L5L309_PTEAL | L5KT49 | L5L309 | Fasciculation and elongation protein zeta-2. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.517 |
FRMD4A | L5L309_PTEAL | L5KZZ3 | L5L309 | FERM domain-containing protein 4A. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.513 |
GPRIN1 | L5L309_PTEAL | L5JUJ3 | L5L309 | G protein-regulated inducer of neurite outgrowth 1. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.515 |
L5K0K0_PTEAL | CORO6 | L5K0K0 | L5JRB6 | Rho guanine nucleotide exchange factor 5. | Coronin; Belongs to the WD repeat coronin family. | 0.785 |
L5K0K0_PTEAL | L5L309_PTEAL | L5K0K0 | L5L309 | Rho guanine nucleotide exchange factor 5. | Ral guanine nucleotide dissociation stimulator-like 3. | 0.514 |
L5L309_PTEAL | ARHGAP28 | L5L309 | L5K310 | Ral guanine nucleotide dissociation stimulator-like 3. | Rho GTPase-activating protein 28. | 0.563 |
L5L309_PTEAL | CORO6 | L5L309 | L5JRB6 | Ral guanine nucleotide dissociation stimulator-like 3. | Coronin; Belongs to the WD repeat coronin family. | 0.531 |
L5L309_PTEAL | FEZ2 | L5L309 | L5KT49 | Ral guanine nucleotide dissociation stimulator-like 3. | Fasciculation and elongation protein zeta-2. | 0.517 |
L5L309_PTEAL | FRMD4A | L5L309 | L5KZZ3 | Ral guanine nucleotide dissociation stimulator-like 3. | FERM domain-containing protein 4A. | 0.513 |
L5L309_PTEAL | GPRIN1 | L5L309 | L5JUJ3 | Ral guanine nucleotide dissociation stimulator-like 3. | G protein-regulated inducer of neurite outgrowth 1. | 0.515 |
L5L309_PTEAL | L5K0K0_PTEAL | L5L309 | L5K0K0 | Ral guanine nucleotide dissociation stimulator-like 3. | Rho guanine nucleotide exchange factor 5. | 0.514 |
L5L309_PTEAL | NINJ2 | L5L309 | L5JU90 | Ral guanine nucleotide dissociation stimulator-like 3. | Ninjurin-2. | 0.515 |
L5L309_PTEAL | NRSN1 | L5L309 | L5K4U4 | Ral guanine nucleotide dissociation stimulator-like 3. | Neurensin-1. | 0.534 |
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