STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFAND6AN1-type zinc finger protein 6. (211 aa)    
Predicted Functional Partners:
APLF
Aprataxin and PNK-like factor.
      
 0.733
CTDSP2
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2.
   
 
 0.726
PPM1F
Protein phosphatase 1F.
      
 0.717
ERCC4
DNA repair endonuclease XPF.
      
 0.706
RABEP1
Rab GTPase-binding effector protein 1.
   
 0.694
RABEP2
Rab GTPase-binding effector protein 2.
   
 0.694
L5L6X9_PTEAL
60S ribosomal protein L40.
    
 0.668
PEX6
Peroxisome assembly factor 2.
     
 0.657
LYPLA2
Acyl-protein thioesterase 2.
   
  
 0.598
L5JL29_PTEAL
Cytochrome b5 reductase 4.
      
 0.594
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.