Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCL2 | BCL2L1 | L5KJZ7 | L5JZZ5 | Apoptosis regulator Bcl-2. | Bcl-2-like protein 1. | 0.972 |
BCL2 | BID | L5KJZ7 | L5JTG3 | Apoptosis regulator Bcl-2. | BH3-interacting domain death agonist. | 0.998 |
BCL2 | BIRC5 | L5KJZ7 | L5KL79 | Apoptosis regulator Bcl-2. | Baculoviral IAP repeat-containing protein 5. | 0.520 |
BCL2 | CTSD | L5KJZ7 | L5KQK6 | Apoptosis regulator Bcl-2. | Cathepsin D; Belongs to the peptidase A1 family. | 0.931 |
BCL2 | CTSH | L5KJZ7 | L5L3X6 | Apoptosis regulator Bcl-2. | Cathepsin H; Belongs to the peptidase C1 family. | 0.905 |
BCL2L1 | BCL2 | L5JZZ5 | L5KJZ7 | Bcl-2-like protein 1. | Apoptosis regulator Bcl-2. | 0.972 |
BCL2L1 | BID | L5JZZ5 | L5JTG3 | Bcl-2-like protein 1. | BH3-interacting domain death agonist. | 0.987 |
BCL2L1 | CTSD | L5JZZ5 | L5KQK6 | Bcl-2-like protein 1. | Cathepsin D; Belongs to the peptidase A1 family. | 0.902 |
BCL2L1 | CTSH | L5JZZ5 | L5L3X6 | Bcl-2-like protein 1. | Cathepsin H; Belongs to the peptidase C1 family. | 0.901 |
BID | BCL2 | L5JTG3 | L5KJZ7 | BH3-interacting domain death agonist. | Apoptosis regulator Bcl-2. | 0.998 |
BID | BCL2L1 | L5JTG3 | L5JZZ5 | BH3-interacting domain death agonist. | Bcl-2-like protein 1. | 0.987 |
BID | CTSD | L5JTG3 | L5KQK6 | BH3-interacting domain death agonist. | Cathepsin D; Belongs to the peptidase A1 family. | 0.908 |
BID | CTSH | L5JTG3 | L5L3X6 | BH3-interacting domain death agonist. | Cathepsin H; Belongs to the peptidase C1 family. | 0.907 |
BIRC5 | BCL2 | L5KL79 | L5KJZ7 | Baculoviral IAP repeat-containing protein 5. | Apoptosis regulator Bcl-2. | 0.520 |
BIRC5 | CTSD | L5KL79 | L5KQK6 | Baculoviral IAP repeat-containing protein 5. | Cathepsin D; Belongs to the peptidase A1 family. | 0.651 |
BIRC5 | CTSH | L5KL79 | L5L3X6 | Baculoviral IAP repeat-containing protein 5. | Cathepsin H; Belongs to the peptidase C1 family. | 0.661 |
BIRC5 | L5KYH3_PTEAL | L5KL79 | L5KYH3 | Baculoviral IAP repeat-containing protein 5. | Baculoviral IAP repeat-containing protein 3. | 0.938 |
CSTA | CTSH | L5L2X3 | L5L3X6 | Cystatin-A; Belongs to the cystatin family. | Cathepsin H; Belongs to the peptidase C1 family. | 0.594 |
CTSD | BCL2 | L5KQK6 | L5KJZ7 | Cathepsin D; Belongs to the peptidase A1 family. | Apoptosis regulator Bcl-2. | 0.931 |
CTSD | BCL2L1 | L5KQK6 | L5JZZ5 | Cathepsin D; Belongs to the peptidase A1 family. | Bcl-2-like protein 1. | 0.902 |
page 1 of 3