STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5L6U2_PTEALScaffold attachment factor B2. (1029 aa)    
Predicted Functional Partners:
L5L2N6_PTEAL
Zinc finger protein 699.
    
 
 0.720
SAFB
Scaffold attachment factor B1.
  
   
0.679
L5KKE6_PTEAL
Apoptotic chromatin condensation inducer in the nucleus.
   
 
 0.648
TEX45
Zinc finger protein 358.
    
 
 0.602
L5JR04_PTEAL
RING finger protein 13.
      
 0.524
MGA
MAX associated protein.
    
 
 0.524
L5L0S4_PTEAL
ATP-binding cassette sub-family A member 12.
      
 0.518
RBM7
RNA-binding protein 7.
      
 0.513
ZNF622
Zinc finger protein 622.
      
 0.511
CASP14
Caspase-14; Belongs to the peptidase C14A family.
      
 0.510
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.