Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DEDD2 | DENR | L5L7A9 | L5KS69 | DNA-binding death effector domain-containing protein 2. | Density-regulated protein; Belongs to the DENR family. | 0.513 |
DEDD2 | ERCC6L | L5L7A9 | L5KWV0 | DNA-binding death effector domain-containing protein 2. | DNA excision repair protein ERCC-6-like protein. | 0.509 |
DEDD2 | FBXO5 | L5L7A9 | L5KGN5 | DNA-binding death effector domain-containing protein 2. | F-box only protein 5. | 0.516 |
DEDD2 | GTF2F1 | L5L7A9 | L5L8T6 | DNA-binding death effector domain-containing protein 2. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.522 |
DEDD2 | L5K2J1_PTEAL | L5L7A9 | L5K2J1 | DNA-binding death effector domain-containing protein 2. | Bcl-2-modifying factor. | 0.540 |
DEDD2 | L5KJA0_PTEAL | L5L7A9 | L5KJA0 | DNA-binding death effector domain-containing protein 2. | Zinc finger and BTB domain-containing protein 11. | 0.535 |
DEDD2 | L5KRT8_PTEAL | L5L7A9 | L5KRT8 | DNA-binding death effector domain-containing protein 2. | Nucleolar transcription factor 1. | 0.499 |
DEDD2 | NUDT2 | L5L7A9 | L5KC04 | DNA-binding death effector domain-containing protein 2. | Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]. | 0.508 |
DEDD2 | SNAPC1 | L5L7A9 | L5KH57 | DNA-binding death effector domain-containing protein 2. | snRNA-activating protein complex subunit 1. | 0.509 |
DEDD2 | ZNF526 | L5L7A9 | L5L971 | DNA-binding death effector domain-containing protein 2. | Zinc finger protein 526. | 0.589 |
DENR | DEDD2 | L5KS69 | L5L7A9 | Density-regulated protein; Belongs to the DENR family. | DNA-binding death effector domain-containing protein 2. | 0.513 |
DENR | L5KJA0_PTEAL | L5KS69 | L5KJA0 | Density-regulated protein; Belongs to the DENR family. | Zinc finger and BTB domain-containing protein 11. | 0.589 |
DENR | L5KRT8_PTEAL | L5KS69 | L5KRT8 | Density-regulated protein; Belongs to the DENR family. | Nucleolar transcription factor 1. | 0.534 |
DENR | SNAPC1 | L5KS69 | L5KH57 | Density-regulated protein; Belongs to the DENR family. | snRNA-activating protein complex subunit 1. | 0.517 |
ERCC6L | DEDD2 | L5KWV0 | L5L7A9 | DNA excision repair protein ERCC-6-like protein. | DNA-binding death effector domain-containing protein 2. | 0.509 |
ERCC6L | FBXO5 | L5KWV0 | L5KGN5 | DNA excision repair protein ERCC-6-like protein. | F-box only protein 5. | 0.641 |
FBXO5 | DEDD2 | L5KGN5 | L5L7A9 | F-box only protein 5. | DNA-binding death effector domain-containing protein 2. | 0.516 |
FBXO5 | ERCC6L | L5KGN5 | L5KWV0 | F-box only protein 5. | DNA excision repair protein ERCC-6-like protein. | 0.641 |
GTF2F1 | DEDD2 | L5L8T6 | L5L7A9 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | DNA-binding death effector domain-containing protein 2. | 0.522 |
GTF2F1 | L5KRT8_PTEAL | L5L8T6 | L5KRT8 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Nucleolar transcription factor 1. | 0.402 |
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