STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEDD2DNA-binding death effector domain-containing protein 2. (326 aa)    
Predicted Functional Partners:
ZNF526
Zinc finger protein 526.
      
 0.589
L5K2J1_PTEAL
Bcl-2-modifying factor.
      
 0.540
L5KJA0_PTEAL
Zinc finger and BTB domain-containing protein 11.
      
 0.535
GTF2F1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
      
 0.522
FBXO5
F-box only protein 5.
      
 0.516
DENR
Density-regulated protein; Belongs to the DENR family.
      
 0.513
SNAPC1
snRNA-activating protein complex subunit 1.
      
 0.509
ERCC6L
DNA excision repair protein ERCC-6-like protein.
      
 0.509
NUDT2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
      
 0.508
L5KRT8_PTEAL
Nucleolar transcription factor 1.
      
 0.499
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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