STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK47026.1KEGG: son:SO3808 hypothetical protein. (343 aa)    
Predicted Functional Partners:
ABK49934.1
PFAM: conserved hypothetical protein 22; KEGG: son:SO4189 hypothetical protein.
   
 
 0.781
ABK47027.1
KEGG: son:SO3807 sterol desaturase family protein.
 
   
 0.747
ABK49800.1
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: son:SO0694 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.529
ABK49634.1
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; PKD domain containing protein; Proprotein convertase, P; KEGG: son:SO0867 serine protease, subtilase family; Belongs to the peptidase S8 family.
  
  
 0.527
ABK47920.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO1911 oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.522
ABK50320.1
PFAM: regulatory protein, TetR; KEGG: son:SO4675 transcriptional regulator, TetR family.
  
   
 0.487
ABK46492.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein.
  
  
 0.457
ABK46546.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vpa:VPA0382 putative sorbitol-6-phosphate 2-dehydrogenase.
  
  
 0.457
ABK46570.1
TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO4382 3-oxoacyl-(acyl-carrier-protein) reductase.
  
  
 0.457
ABK47762.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2935 short chain dehydrogenase.
  
  
 0.457
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.