node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK46278.1 | rlmH | Shewana3_0033 | Shewana3_0996 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.527 |
ABK46278.1 | rsfS | Shewana3_0033 | Shewana3_0997 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.640 |
ABK47226.1 | ABK47228.1 | Shewana3_0991 | Shewana3_0993 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | 0.603 |
ABK47226.1 | mrdA | Shewana3_0991 | Shewana3_0995 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall. | 0.831 |
ABK47226.1 | mrdB | Shewana3_0991 | Shewana3_0994 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.657 |
ABK47226.1 | rlmH | Shewana3_0991 | Shewana3_0996 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.593 |
ABK47226.1 | rlpA | Shewana3_0991 | Shewana3_0992 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.527 |
ABK47226.1 | rsfS | Shewana3_0991 | Shewana3_0997 | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.508 |
ABK47228.1 | ABK47226.1 | Shewana3_0993 | Shewana3_0991 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.603 |
ABK47228.1 | ABK47234.1 | Shewana3_0993 | Shewana3_0999 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: son:SO1172 DNA polymerase III delta subunit. | 0.531 |
ABK47228.1 | mrdA | Shewana3_0993 | Shewana3_0995 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall. | 0.836 |
ABK47228.1 | mrdB | Shewana3_0993 | Shewana3_0994 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.776 |
ABK47228.1 | nadD | Shewana3_0993 | Shewana3_0998 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.444 |
ABK47228.1 | rlmH | Shewana3_0993 | Shewana3_0996 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.613 |
ABK47228.1 | rlpA | Shewana3_0993 | Shewana3_0992 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.831 |
ABK47228.1 | rsfS | Shewana3_0993 | Shewana3_0997 | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.612 |
ABK47234.1 | ABK47228.1 | Shewana3_0999 | Shewana3_0993 | TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: son:SO1172 DNA polymerase III delta subunit. | TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative. | 0.531 |
ABK47234.1 | mrdA | Shewana3_0999 | Shewana3_0995 | TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: son:SO1172 DNA polymerase III delta subunit. | Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall. | 0.492 |
ABK47234.1 | mrdB | Shewana3_0999 | Shewana3_0994 | TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: son:SO1172 DNA polymerase III delta subunit. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.477 |
ABK47234.1 | nadD | Shewana3_0999 | Shewana3_0998 | TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: son:SO1172 DNA polymerase III delta subunit. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.837 |