Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK47294.1 | ABK47295.1 | Shewana3_1059 | Shewana3_1060 | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein. | 0.527 |
ABK47294.1 | ABK47296.1 | Shewana3_1059 | Shewana3_1061 | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein. | 0.553 |
ABK47294.1 | ABK49706.1 | Shewana3_1059 | Shewana3_3483 | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | PFAM: CBS domain containing protein; KEGG: son:SO0805 CBS domain protein. | 0.717 |
ABK47295.1 | ABK47294.1 | Shewana3_1060 | Shewana3_1059 | PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein. | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | 0.527 |
ABK47295.1 | ABK47296.1 | Shewana3_1060 | Shewana3_1061 | PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein. | PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein. | 0.863 |
ABK47296.1 | ABK47294.1 | Shewana3_1061 | Shewana3_1059 | PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein. | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | 0.553 |
ABK47296.1 | ABK47295.1 | Shewana3_1061 | Shewana3_1060 | PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein. | PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein. | 0.863 |
ABK49706.1 | ABK47294.1 | Shewana3_3483 | Shewana3_1059 | PFAM: CBS domain containing protein; KEGG: son:SO0805 CBS domain protein. | PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative. | 0.717 |