Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK47304.1Putative signal transduction protein; KEGG: son:SO1254 hypothetical protein. (279 aa)    
Predicted Functional Partners:
ABK46260.1
Putative signal transduction protein; KEGG: son:SO0013 hypothetical protein.
  
     0.748
ABK47582.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.738
ABK47600.1
PFAM: CheW domain protein; KEGG: son:SO3203 CheW domain protein.
 
     0.670
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.634
ABK46370.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.626
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.612
ABK47557.1
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
    0.599
ABK47551.1
PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: son:SO3254 negative regulator of flagellin synthesis FlgM.
 
     0.593
ABK48862.1
KEGG: son:SO1814 hypothetical protein.
  
     0.593
ABK47583.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
    0.576
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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