STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opgHGlycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (727 aa)    
Predicted Functional Partners:
opgG
Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
  
 0.941
opgD
Periplasmic glucan biosynthesis protein, MdoG; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).
 
  
 0.814
ABK48743.1
Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
  
 0.814
plsB
PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO4602 glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
   
 
 0.480
ABK49274.1
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: son:SO1325 glutamate synthase (NADPH) large chain.
     
 0.461
ABK48120.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO2109 hypothetical protein.
       0.429
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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