Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK48231.1PFAM: proteinase inhibitor I11, ecotin; KEGG: son:SO2312 serine protease inhibitor, ecotin. (183 aa)    
Predicted Functional Partners:
ABK47818.1
KEGG: son:SO3571 hypothetical protein; Belongs to the UPF0319 family.
   
    0.673
ABK49469.1
KEGG: son:SO3679 hypothetical protein.
  
     0.515
ABK46358.1
KEGG: son:SO0113 hypothetical protein.
  
     0.491
ABK48731.1
PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2718 hypothetical protein.
  
     0.428
ABK46489.1
KEGG: son:SO4482 hypothetical protein.
  
     0.427
ABK49514.1
PFAM: sodium/calcium exchanger membrane region; KEGG: son:SO1001 calcium/proton antiporter.
  
     0.424
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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