STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK48232.1KEGG: cps:CPS_3242 hypothetical protein. (145 aa)    
Predicted Functional Partners:
ABK48541.1
1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2162 TonB dependent receptor-related protein.
  
     0.521
ABK47879.1
KEGG: son:SO2876 hypothetical protein.
  
     0.495
ABK46312.1
PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC1133 transporter, putative.
  
     0.446
ABK48817.1
KEGG: son:SO2808 hypothetical protein.
  
     0.415
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.