STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK48654.1PFAM: Di-haem cytochrome c peroxidase; KEGG: son:SO2178 cytochrome c551 peroxidase. (333 aa)    
Predicted Functional Partners:
ABK46476.1
PFAM: cytochrome c, class I; KEGG: son:SO0264 cytochrome c.
      
 0.547
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.492
ABK50209.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.486
ABK49002.1
PFAM: OmpW family protein; KEGG: son:SO1673 outer membrane protein OmpW, putative.
   
  
 0.482
ABK50333.1
KEGG: son:SO4730 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.471
ABK49369.1
PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: son:SO3542 putative phosphoketolase.
   
    0.461
ABK49542.1
TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0970 fumarate reductase flavoprotein subunit precursor; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
  
 0.456
ABK47725.1
KEGG: son:SO3056 tetraheme cytochrome c.
   
  
 0.450
ABK49285.1
PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: son:SO1312 TolB domain protein.
  
   0.449
ABK46264.1
PFAM: amidohydrolase; WD40 domain protein beta Propeller; KEGG: son:SO0017 hypothetical amidohydrolase.
  
   0.446
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.