Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK47732.1 | ABK49195.1 | Shewana3_1498 | Shewana3_2970 | PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein. | KEGG: vpa:VP2175 putative HAAAP family transport protein. | 0.559 |
ABK47732.1 | ABK49197.1 | Shewana3_1498 | Shewana3_2972 | PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein. | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | 0.419 |
ABK49195.1 | ABK47732.1 | Shewana3_2970 | Shewana3_1498 | KEGG: vpa:VP2175 putative HAAAP family transport protein. | PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein. | 0.559 |
ABK49195.1 | ABK49196.1 | Shewana3_2970 | Shewana3_2971 | KEGG: vpa:VP2175 putative HAAAP family transport protein. | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | 0.472 |
ABK49195.1 | ABK49197.1 | Shewana3_2970 | Shewana3_2972 | KEGG: vpa:VP2175 putative HAAAP family transport protein. | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | 0.691 |
ABK49195.1 | ABK49198.1 | Shewana3_2970 | Shewana3_2973 | KEGG: vpa:VP2175 putative HAAAP family transport protein. | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | 0.514 |
ABK49196.1 | ABK49195.1 | Shewana3_2971 | Shewana3_2970 | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | KEGG: vpa:VP2175 putative HAAAP family transport protein. | 0.472 |
ABK49196.1 | ABK49197.1 | Shewana3_2971 | Shewana3_2972 | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | 0.768 |
ABK49196.1 | ABK49198.1 | Shewana3_2971 | Shewana3_2973 | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | 0.795 |
ABK49197.1 | ABK47732.1 | Shewana3_2972 | Shewana3_1498 | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein. | 0.419 |
ABK49197.1 | ABK49195.1 | Shewana3_2972 | Shewana3_2970 | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | KEGG: vpa:VP2175 putative HAAAP family transport protein. | 0.691 |
ABK49197.1 | ABK49196.1 | Shewana3_2972 | Shewana3_2971 | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | 0.768 |
ABK49197.1 | ABK49198.1 | Shewana3_2972 | Shewana3_2973 | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | 0.794 |
ABK49198.1 | ABK49195.1 | Shewana3_2973 | Shewana3_2970 | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | KEGG: vpa:VP2175 putative HAAAP family transport protein. | 0.514 |
ABK49198.1 | ABK49196.1 | Shewana3_2973 | Shewana3_2971 | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative. | 0.795 |
ABK49198.1 | ABK49197.1 | Shewana3_2973 | Shewana3_2972 | PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein. | PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; Belongs to the UPF0597 family. | 0.794 |