STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK50012.1TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: noc:Noc_2903 type I restriction-modification system M subunit. (574 aa)    
Predicted Functional Partners:
ABK50008.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.994
ABK50011.1
PFAM: restriction modification system DNA specificity domain; KEGG: son:SO0382 type I restriction-modification system, S subunit.
 
 
 0.992
ABK49186.1
PFAM: restriction modification system DNA specificity domain; KEGG: son:SO4264 type I restriction-modification system, S subunit.
 
 
 0.972
ABK48259.1
PFAM: restriction modification system DNA specificity domain; KEGG: spn:SP0508 type I restriction-modification system, S subunit.
 
 
 0.967
ABK50007.1
PFAM: protein of unknown function DUF45; KEGG: son:SO0379 hypothetical protein.
 
     0.933
ABK48257.1
PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; KEGG: sbo:SBO_4158 putative type I restriction enzyme R protein.
 
 
 0.899
ABK50010.1
Hypothetical protein.
       0.760
ABK50009.1
Hypothetical protein.
       0.757
ABK49189.1
PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; KEGG: son:SO4267 type I restriction-modification system, R subunit.
 
   
 0.707
ABK50013.1
PFAM: HNH endonuclease; KEGG: mca:MCA0503 hypothetical protein.
     
 0.541
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.