STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK50173.1PFAM: protein of unknown function DUF1332; KEGG: son:SO4562 hypothetical protein. (153 aa)    
Predicted Functional Partners:
ABK46755.1
KEGG: son:SO0516 hypothetical protein.
   
    0.673
ABK50172.1
KEGG: son:SO4561 hypothetical protein.
 
     0.584
ABK48067.1
PFAM: protein of unknown function DUF938; KEGG: son:SO2050 hypothetical protein.
 
     0.442
ABK48651.1
KEGG: son:SO2181 hypothetical protein.
  
    0.426
ABK48349.1
PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: son:SO2352 bax protein, putative.
  
     0.425
ABK46869.1
KEGG: son:SO4011 hypothetical protein.
 
     0.407
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.