STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APICC_04255RBR-type E3 ubiquitin transferase. (509 aa)    
Predicted Functional Partners:
APICC_01901
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.982
APICC_03198
RING-boxA.
    
 0.966
APICC_02706
NEDD8-like protein.
    
 0.962
APICC_01405
Ubiquitin.
    
 0.959
APICC_07120
Cullin-1; Belongs to the cullin family.
   
 0.957
APICC_02509
Ubiquitin.
    
  0.946
APICC_06127
Cullin-3; Belongs to the cullin family.
   
 0.924
APICC_05693
Ubiquitin.
    
  0.845
APICC_00764
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.808
APICC_03137
S-phase kinase-associated protein; Belongs to the SKP1 family.
    
 0.792
Your Current Organism:
Apis cerana
NCBI taxonomy Id: 94128
Other names: A. cerana cerana, Apis cerana cerana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.