Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APICC_01553 | APICC_04302 | A0A2A3E2I8 | A0A2A3E744 | Phosphoglycerate kinase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.531 |
APICC_01553 | APICC_04461 | A0A2A3E2I8 | A0A2A3EBS5 | Phosphoglycerate kinase. | Cleft lip and palate transmembrane protein. | 0.627 |
APICC_01553 | APICC_04752 | A0A2A3E2I8 | A0A2A3EGN2 | Phosphoglycerate kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.951 |
APICC_01553 | APICC_05835 | A0A2A3E2I8 | A0A2A3ESB4 | Phosphoglycerate kinase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 0.829 |
APICC_01553 | APICC_05922 | A0A2A3E2I8 | A0A2A3EJG4 | Phosphoglycerate kinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.996 |
APICC_01553 | APICC_07179 | A0A2A3E2I8 | A0A2A3EF96 | Phosphoglycerate kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.951 |
APICC_01553 | APICC_08244 | A0A2A3E2I8 | A0A2A3E7N9 | Phosphoglycerate kinase. | Transketolase. | 0.940 |
APICC_03275 | APICC_04302 | A0A2A3EQ97 | A0A2A3E744 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.842 |
APICC_03275 | APICC_04461 | A0A2A3EQ97 | A0A2A3EBS5 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cleft lip and palate transmembrane protein. | 0.704 |
APICC_03275 | APICC_04752 | A0A2A3EQ97 | A0A2A3EGN2 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.738 |
APICC_03275 | APICC_05037 | A0A2A3EQ97 | A0A2A3E2I9 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Alanine aminotransferase. | 0.731 |
APICC_03275 | APICC_05922 | A0A2A3EQ97 | A0A2A3EJG4 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.534 |
APICC_03275 | APICC_07179 | A0A2A3EQ97 | A0A2A3EF96 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.738 |
APICC_04302 | APICC_01553 | A0A2A3E744 | A0A2A3E2I8 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoglycerate kinase. | 0.531 |
APICC_04302 | APICC_03275 | A0A2A3E744 | A0A2A3EQ97 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.842 |
APICC_04302 | APICC_04461 | A0A2A3E744 | A0A2A3EBS5 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Cleft lip and palate transmembrane protein. | 0.684 |
APICC_04302 | APICC_04752 | A0A2A3E744 | A0A2A3EGN2 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.971 |
APICC_04302 | APICC_05037 | A0A2A3E744 | A0A2A3E2I9 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Alanine aminotransferase. | 0.672 |
APICC_04302 | APICC_05835 | A0A2A3E744 | A0A2A3ESB4 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 0.615 |
APICC_04302 | APICC_05922 | A0A2A3E744 | A0A2A3EJG4 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.640 |
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