STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APICC_048982-oxoglutarate and iron-dependent oxygenase domain-containing protein. (601 aa)    
Predicted Functional Partners:
APICC_05253
Elongation factor Tu.
   
   0.838
APICC_05772
Sterol regulatory element-binding protein.
   
 
 0.693
APICC_03700
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.668
APICC_06273
Pre-rRNA-processing protein TSR1.
   
    0.645
APICC_05339
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B.
   
 
 0.645
APICC_02814
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.638
APICC_08668
Coproporphyrinogen-III oxidase.
   
  
 0.623
APICC_05895
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.621
APICC_07453
Eukaryotic peptide chain release factor subunit.
   
 
 0.616
APICC_03263
ATP-binding cassette sub-family F member.
  
   0.593
Your Current Organism:
Apis cerana
NCBI taxonomy Id: 94128
Other names: A. cerana cerana, Apis cerana cerana
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