STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APICC_08746Ubiquitin protein. (73 aa)    
Predicted Functional Partners:
APICC_02177
U4/U6.U5 tri-snRNP-associated protein.
    
 0.995
APICC_04778
Pre-mRNA-processing-splicing factor.
    
 
 0.986
APICC_00728
Microfibrillar-associated protein.
    
 0.978
APICC_00089
Pre-mRNA-splicing factor 38A.
    
 0.973
APICC_04829
WW domain-binding protein.
    
  0.915
APICC_05670
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  0.912
APICC_01742
Zinc finger matrin-type protein.
    
 0.908
APICC_05126
Pre-mRNA-splicing factor RBM22.
   
  0.902
APICC_02974
Pre-mRNA-processing factor.
    
 0.898
APICC_04846
Cell division cycle 5 protein.
    
 0.897
Your Current Organism:
Apis cerana
NCBI taxonomy Id: 94128
Other names: A. cerana cerana, Apis cerana cerana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.