STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APICC_06179DNA repair protein XRCC4. (284 aa)    
Predicted Functional Partners:
APICC_00134
Kaptin.
    
 0.957
APICC_03098
Signal peptidase complex subunit.
   
 0.931
APICC_05463
Tumor suppressor candidate.
   
 0.930
APICC_05892
WD repeat-containing protein.
    
 0.926
APICC_02260
DEP domain-containing protein.
    
 0.923
APICC_01938
WD repeat-containing protein.
    
 0.922
APICC_02442
Signal peptidase complex subunit 3.
    
 0.920
APICC_03511
DNA ligase; Belongs to the ATP-dependent DNA ligase family.
    
 0.838
APICC_08058
SZT2-like protein.
    
 0.826
APICC_02922
Uncharacterized protein.
    
 0.826
Your Current Organism:
Apis cerana
NCBI taxonomy Id: 94128
Other names: A. cerana cerana, Apis cerana cerana
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.