Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APICC_01949 | APICC_03592 | A0A2A3E0D2 | A0A2A3E844 | HBS1 protein. | Ribosome-recycling factor. | 0.530 |
APICC_01949 | APICC_03870 | A0A2A3E0D2 | A0A2A3EPQ7 | HBS1 protein. | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.994 |
APICC_01949 | APICC_07391 | A0A2A3E0D2 | A0A2A3EU64 | HBS1 protein. | GTP-binding protein. | 0.407 |
APICC_03592 | APICC_01949 | A0A2A3E844 | A0A2A3E0D2 | Ribosome-recycling factor. | HBS1 protein. | 0.530 |
APICC_03592 | APICC_03870 | A0A2A3E844 | A0A2A3EPQ7 | Ribosome-recycling factor. | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.585 |
APICC_03592 | APICC_07391 | A0A2A3E844 | A0A2A3EU64 | Ribosome-recycling factor. | GTP-binding protein. | 0.584 |
APICC_03870 | APICC_01949 | A0A2A3EPQ7 | A0A2A3E0D2 | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | HBS1 protein. | 0.994 |
APICC_03870 | APICC_03592 | A0A2A3EPQ7 | A0A2A3E844 | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | Ribosome-recycling factor. | 0.585 |
APICC_03870 | APICC_07391 | A0A2A3EPQ7 | A0A2A3EU64 | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | GTP-binding protein. | 0.519 |
APICC_06845 | APICC_07391 | A0A2A3EQ82 | A0A2A3EU64 | Peptidyl-tRNA hydrolase. | GTP-binding protein. | 0.404 |
APICC_07391 | APICC_01949 | A0A2A3EU64 | A0A2A3E0D2 | GTP-binding protein. | HBS1 protein. | 0.407 |
APICC_07391 | APICC_03592 | A0A2A3EU64 | A0A2A3E844 | GTP-binding protein. | Ribosome-recycling factor. | 0.584 |
APICC_07391 | APICC_03870 | A0A2A3EU64 | A0A2A3EPQ7 | GTP-binding protein. | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.519 |
APICC_07391 | APICC_06845 | A0A2A3EU64 | A0A2A3EQ82 | GTP-binding protein. | Peptidyl-tRNA hydrolase. | 0.404 |