STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6Q2U9Uncharacterized protein. (1702 aa)    
Predicted Functional Partners:
A0A2Z6REC7
Thymidylat_synt domain-containing protein.
    
 0.649
A0A2Z6S454
Nucleoside diphosphate kinase.
     
 0.619
A0A2Z6RGM0
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.602
A0A2Z6Q237
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.561
A0A2Z6QI91
Uncharacterized protein.
    
  0.527
A0A2Z6SC56
Uncharacterized protein.
    
  0.527
A0A2Z6QRW0
Uncharacterized protein.
    
  0.509
A0A2Z6RRL2
Uncharacterized protein.
    
  0.509
A0A2Z6SB19
Uncharacterized protein.
    
  0.509
A0A2Z6QP62
Gp_dh_C domain-containing protein.
     
 0.503
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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