STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QA20Uncharacterized protein. (863 aa)    
Predicted Functional Partners:
A0A2Z6RCL4
DNA_mis_repair domain-containing protein.
  
 
0.995
A0A2Z6RSY6
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.960
A0A2Z6RGI6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.946
A0A2Z6QHP2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.943
A0A2Z6SEH2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.937
A0A2Z6SAS4
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.927
A0A2Z6S463
MutS_II domain-containing protein.
  
 0.891
A0A2Z6RIM3
Uncharacterized protein.
    
 0.838
A0A2Z6S643
Vezatin domain-containing protein.
   
 0.760
A0A2Z6S959
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.760
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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