STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QD09Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
A0A2Z6RZZ6
Uncharacterized protein.
     
 0.792
A0A2Z6QRC3
Uncharacterized protein.
    
 0.791
A0A2Z6RRQ0
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.718
A0A2Z6RNK2
SH3 domain-containing protein.
     
 0.702
A0A2Z6Q6F6
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.699
A0A2Z6RN97
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.689
A0A2Z6S650
Uncharacterized protein.
     
 0.683
A0A2Z6SBE3
Uncharacterized protein.
     
 0.683
A0A2Z6RK15
Peroxisomal membrane protein PEX16.
     
 0.682
A0A2Z6Q651
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.673
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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