STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QDY9Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)    
Predicted Functional Partners:
A0A2Z6Q612
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
A0A2Z6Q9T1
Uncharacterized protein.
   
 0.999
A0A2Z6QGW3
Uncharacterized protein.
   
 0.999
A0A2Z6QK49
Uncharacterized protein.
   
 0.999
A0A2Z6QM20
Ribosomal_L19e domain-containing protein.
   
 0.999
A0A2Z6QTW8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
A0A2Z6QWN7
Uncharacterized protein.
   
 0.999
A0A2Z6QYX8
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
0.999
A0A2Z6QZC4
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
A0A2Z6R501
Uncharacterized protein.
   
 0.999
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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