STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QFH6SH3 domain-containing protein. (554 aa)    
Predicted Functional Partners:
A0A2Z6RM23
Uncharacterized protein.
    
 
 0.912
A0A2Z6S239
BAR domain-containing protein.
    
 
 0.904
A0A2Z6SJ67
Uncharacterized protein.
    
 
 0.902
A0A2Z6QJJ7
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.813
A0A2Z6S274
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.736
A0A2Z6SJX4
MHD domain-containing protein.
    
 0.733
A0A2Z6SE99
Uncharacterized protein.
    
 
 0.707
A0A2Z6QKY9
Uncharacterized protein.
    
 0.694
A0A2Z6RZ90
E3 ubiquitin-protein ligase.
    
 
 0.678
A0A2Z6S624
Rab-GAP TBC domain-containing protein.
    
 
 0.656
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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