STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QGC7Uncharacterized protein. (715 aa)    
Predicted Functional Partners:
A0A2Z6QRC3
Uncharacterized protein.
    
 0.896
A0A2Z6RNA6
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.871
A0A2Z6RQV9
Uncharacterized protein.
   
 0.793
A0A2Z6RXB3
Uncharacterized protein.
  
0.763
A0A2Z6R9B4
Uncharacterized protein.
  
0.760
A0A2Z6RK15
Peroxisomal membrane protein PEX16.
     
 0.735
A0A2Z6R9G4
RECA_2 domain-containing protein.
    
   0.726
A0A2Z6SBR3
RECA_2 domain-containing protein.
    
   0.726
A0A2Z6RNK2
SH3 domain-containing protein.
   
 
 0.713
A0A2Z6RRQ0
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.712
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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