STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QHG9Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
A0A2Z6QHC2
Uncharacterized protein.
    
 0.718
A0A2Z6SFK0
Uncharacterized protein.
    
 0.685
A0A2Z6QIZ1
Proteasome subunit beta.
   
 0.611
A0A2Z6QN12
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
  0.611
A0A2Z6RA69
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
  0.611
A0A2Z6SNI5
Protein disulfide-isomerase.
    
  0.611
A0A2Z6RFC0
Uncharacterized protein.
    
  0.582
A0A2Z6RY48
RING-type domain-containing protein.
    
  0.562
A0A2Z6QG45
Putative acetyl-CoA carboxylase (ACC).
   
 0.560
A0A2Z6QIR5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
  0.556
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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