STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QKL4Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
A0A2Z6QE31
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.846
A0A2Z6RGU8
Elp3 domain-containing protein.
  
 
 0.710
A0A2Z6RK08
Uncharacterized protein.
  
 
 0.706
A0A2Z6R8U2
Uncharacterized protein.
  
  
 0.692
A0A2Z6S3V8
Tr-type G domain-containing protein.
 
      0.570
A0A2Z6Q8C4
Peptidase_M24 domain-containing protein.
    
 
 0.549
A0A2Z6R6L1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.549
A0A2Z6R9W5
tRNA-synt_1e domain-containing protein.
  
  
 0.527
A0A2Z6QIY8
Histidine biosynthesis trifunctional protein.
   
 
 0.464
A0A2Z6RNF1
Uncharacterized protein.
 
      0.459
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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