STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QKZ6Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
A0A2Z6S9A2
Cnd3 domain-containing protein.
   
 0.986
A0A2Z6RJE5
Structural maintenance of chromosomes protein.
   
 0.981
A0A2Z6S8X5
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.980
A0A2Z6QNG7
Structural maintenance of chromosomes protein.
   
 0.979
A0A2Z6RFQ6
SMC_N domain-containing protein.
   
 0.865
A0A2Z6SRH6
Structural maintenance of chromosomes protein.
   
 0.851
A0A2Z6R5R8
SMC_N domain-containing protein.
   
 0.847
A0A2Z6RJ58
SMC_N domain-containing protein.
   
 0.847
A0A2Z6RZ12
SMC hinge domain-containing protein.
   
 0.847
A0A2Z6S054
SMC_N domain-containing protein.
   
 0.847
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.