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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QL60Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
A0A2Z6QR21
Brix domain-containing protein.
   
 
 0.688
A0A2Z6S9G2
Ribosomal_L18_c domain-containing protein.
    
 
 0.674
A0A2Z6RQ25
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.595
A0A2Z6R8G5
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.582
A0A2Z6RQS9
Uncharacterized protein.
   
  
 0.547
A0A2Z6Q1C3
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.541
A0A2Z6RI94
Brix domain-containing protein.
   
    0.536
A0A2Z6SNN1
WD_REPEATS_REGION domain-containing protein.
   
  
 0.501
A0A2Z6Q4U5
WD_REPEATS_REGION domain-containing protein.
   
    0.485
A0A2Z6QHY3
Uncharacterized protein.
   
    0.480
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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