Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QL60Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
A0A2Z6QR21
Brix domain-containing protein.
   
 
 0.666
A0A2Z6S9G2
Ribosomal_L18_c domain-containing protein.
   
 
 0.654
A0A2Z6RQ25
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.629
A0A2Z6Q1C3
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.626
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
     
  0.590
A0A2Z6RI94
Brix domain-containing protein.
   
    0.586
A0A2Z6R8G5
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.583
A0A2Z6QHY3
Uncharacterized protein.
   
  
 0.568
A0A2Z6RQS9
Uncharacterized protein.
   
  
 0.560
A0A2Z6Q4U5
WD_REPEATS_REGION domain-containing protein.
   
    0.548
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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