STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QL94Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
A0A2Z6RCL4
DNA_mis_repair domain-containing protein.
    
 0.960
A0A2Z6QJI5
Uncharacterized protein.
    
   0.958
A0A2Z6Q2S6
Uncharacterized protein; Belongs to the AAA ATPase family.
    
   0.919
A0A2Z6RGI6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.891
A0A2Z6QHP2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.889
A0A2Z6RSY6
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.866
A0A2Z6S463
MutS_II domain-containing protein.
  
 0.866
A0A2Z6SAS4
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.866
A0A2Z6SEH2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.866
A0A2Z6RIM3
Uncharacterized protein.
    
 0.797
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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