STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QQC4Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
A0A2Z6QI46
Uncharacterized protein.
    
  0.718
A0A2Z6RJG7
Uncharacterized protein.
    
 0.697
A0A2Z6QFY3
Uncharacterized protein.
   
   0.632
A0A2Z6S1E7
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.625
A0A2Z6R1W9
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.621
A0A2Z6SN01
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.614
A0A2Z6Q250
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
   0.586
A0A2Z6QGR7
Uncharacterized protein.
   
   0.586
A0A2Z6RH31
Ribosomal_S17_N domain-containing protein.
   
   0.582
A0A2Z6S8Y1
Uncharacterized protein.
   
 
 0.582
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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