STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QSM2Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A2Z6Q8H4
Uncharacterized protein.
  
     0.524
A0A2Z6RSF6
Uncharacterized protein.
  
     0.522
A0A2Z6RVQ5
Uncharacterized protein.
  
     0.519
A0A2Z6S6V7
Uncharacterized protein.
  
     0.517
A0A2Z6QUF9
Uncharacterized protein.
  
     0.515
A0A2Z6RNA2
Uncharacterized protein.
  
     0.501
A0A2Z6QF16
Uncharacterized protein.
 
     0.474
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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