STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QVZ8GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. (395 aa)    
Predicted Functional Partners:
A0A2Z6RJ65
Uncharacterized protein.
   
 0.998
A0A2Z6SFK9
Uncharacterized protein.
   
 0.998
A0A2Z6QAM4
Uncharacterized protein.
    
 0.996
A0A2Z6RLC8
Uncharacterized protein.
    
 0.979
A0A2Z6SF34
Uncharacterized protein.
    
 0.979
A0A2Z6SES3
Uncharacterized protein.
    
 0.906
A0A2Z6QVG7
Uncharacterized protein.
    
 0.904
A0A2Z6QNL3
Uncharacterized protein.
   
 
 0.889
A0A2Z6RWM5
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 0.885
A0A2Z6QBS8
PigN domain-containing protein.
    
 0.812
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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