STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QW26WD_REPEATS_REGION domain-containing protein. (492 aa)    
Predicted Functional Partners:
A0A2Z6RDX5
B30.2/SPRY domain-containing protein.
    
 0.999
A0A2Z6R4X5
Uncharacterized protein.
    
 0.997
A0A2Z6RSI4
Uncharacterized protein.
    
 0.996
A0A2Z6RTR5
PHD-type domain-containing protein.
    
 0.994
A0A2Z6RA42
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.977
A0A2Z6RAW1
WD_REPEATS_REGION domain-containing protein.
    
 
 0.961
A0A2Z6RML4
WD_REPEATS_REGION domain-containing protein.
    
 0.946
A0A2Z6RS70
WD_REPEATS_REGION domain-containing protein.
    
0.943
A0A2Z6SDG0
Uncharacterized protein.
    
 0.943
A0A2Z6SMW1
WD_REPEATS_REGION domain-containing protein.
    
0.943
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.