STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QX42Uncharacterized protein. (1042 aa)    
Predicted Functional Partners:
A0A2Z6RUC1
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
0.999
A0A2Z6QP33
Uncharacterized protein.
   
0.998
A0A2Z6QNZ1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.992
A0A2Z6SL02
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.981
A0A2Z6RK06
WD_REPEATS_REGION domain-containing protein.
   
 0.960
A0A2Z6RLS0
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.887
A0A2Z6RQX0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.865
A0A2Z6QTJ1
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 
 0.837
A0A2Z6Q5A6
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.829
A0A2Z6R3U0
Uncharacterized protein.
   
 
 0.817
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.